PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0054s0078.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 230aa    MW: 25051.8 Da    PI: 8.2082
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0054s0078.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2582.4e-1863112255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+++AeIrdp   + + +r++lg++ tae Aa a+++a+++++g
  Kalax.0054s0078.1.p  63 HYRGVRQRP-WGKFAAEIRDP---N-KaARVWLGTYSTAEAAALAYDEAALRFKG 112
                          7********.**********9...3.35***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.4E-3262121IPR001471AP2/ERF domain
SMARTSM003801.5E-3663126IPR001471AP2/ERF domain
CDDcd000181.99E-1963121No hitNo description
PROSITE profilePS5103223.69663120IPR001471AP2/ERF domain
PfamPF008474.1E-1363112IPR001471AP2/ERF domain
SuperFamilySSF541716.54E-2163121IPR016177DNA-binding domain
PRINTSPR003672.7E-106475IPR001471AP2/ERF domain
PRINTSPR003672.7E-1086102IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
MSGDEELFPM YSTRSQQDMC VMVSALSRVI GNSSDDSTSL ALPLPMPPPP DFATGSPSLL  60
RRHYRGVRQR PWGKFAAEIR DPNKAARVWL GTYSTAEAAA LAYDEAALRF KGSKAKLNFP  120
ERVEYVHQTT PQLLSPSQPS SLHPLQRNPH SYDVLGSNPD SNIRMKPSAA TTTQSWSPTT  180
MSFSSVSSSS SSSSSSLQEP NQPTCPSMSH YGGPGATNWS YNDNQPEYK*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-2762123163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010457918.16e-48PREDICTED: ethylene-responsive transcription factor ERF114-like
SwissprotQ9FH542e-48EF114_ARATH; Ethylene-responsive transcription factor ERF114
TrEMBLD7MKN81e-47D7MKN8_ARALL; Putative uncharacterized protein
TrEMBLV4K1F61e-47V4K1F6_EUTSA; Uncharacterized protein
STRINGscaffold_802838.13e-47(Arabidopsis lyrata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.14e-37ERF family protein